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By k-dense-ai

datamol

k-dense-ai

Handle molecular data with simpler cheminformatics workflows.

cheminformatics

What it does

Simplifies molecular cheminformatics work through Datamol workflows, examples, API guidance, and recommended practices.

When to use it

Use for standard drug-discovery tasks such as molecular parsing, standardization, descriptors, fingerprints, clustering, conformers, and parallel processing.

How to use it

Give it a molecular cheminformatics coding task; it creates project code using Datamol and native RDKit molecule objects.

Uses


Access · 5

This skill

S3

Write

Writes molecular files to S3

user-provided HTTPS URLs

Read

Reads user-provided HTTPS data

AWS provider environment variables

Read

Reads AWS provider credentials

GOOGLE_APPLICATION_CREDENTIALS

Read

Reads Google Cloud credentials

Good to know

  • advertises something the task does not need

What you need · 7

Requires Python 3.8 or newer.

Requires the datamol package; its RDKit dependency is installed automatically.

Optionally enables cloud I/O with AWS S3 through fsspec.

Optionally enables cloud I/O with Google Cloud Storage through fsspec.


About this skill

Visibility
Public
Repository
k-dense-ai/scientific-agent-skills
Created
Oct 8, 2026
Updated
Oct 8, 2026
Files
9