pdb-database
google-deepmind2k installs
Find experimental 3D structures of biomolecules.
What it does
Finds experimental biomolecular structures, downloads coordinate files, and retrieves experimental metadata from RCSB Protein Data Bank.
When to use it
Use for biomolecular structure searches and downloads, similarity searches, or metadata about structure experiments.
How to use it
Give it a structure search, download, or metadata request; it saves results to files and explains any JSON or GraphQL queries used.
Uses
RP
Latest review
What you need · 3
Requires uv installed and on PATH; directs the agent to the uv skill's setup instructions.
The bundled scripts require Python 3.10 or newer.
Access · 2
This skill
RCSB Protein Data Bank
Read
Retrieves biomolecular structures and metadata
uv
Execute
Sets up uv if needed