alphagenome-single-variant-analysis
google-deepmind2k installs
See how genetic variants may change gene activity.
What it does
Produces reports and plots of predicted genetic variant effects using AlphaGenome.
When to use it
Use for questions about non-coding variant effects, pathogenicity, disease associations, expression, splicing, regulatory effects, or tissue and cell-type ontology resolution.
How to use it
Give it genetic variants to analyze; it saves prediction plots and an analysis report.
Uses
AL
Good to know
- starts one helper agent per item, so the count depends on the work
Latest review
What you need · 4
Requires uv installed and on PATH; all Python execution must use uv run.
Requires Python 3.10 or later for the analysis environment.
Access · 5
This skill
AlphaGenome
Write
Sends variants to AlphaGenome
gencode.v46.annotation.gtf.gz.feather
Read
Downloads reference gene annotations