pathway-enrichment

Analyzes gene lists, rankings, or expression data to identify enriched biological pathways and produce interpreted results, tables, and figures.

When to use it

Use for gene-set enrichment, ranked GSEA, per-sample scoring, enrichment visualization, or help choosing methods, backgrounds, and gene identifiers.

Give it gene lists or ranked gene data; it runs enrichment analysis and writes results tables, a significance dotplot, and reproducibility metadata.