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By google-deepmind

ucsc-conservation-and-tfbs

google-deepmind1.9k installs

Find conservation scores and regulatory binding sites.

What it does

Retrieves evolutionary conservation scores and transcription factor binding sites for genomic variants and regions.

When to use it

Use when assessing conservation at a non-coding variant or finding conservation peaks across a regulatory element.

How to use it

Give it a genomic lookup request; it queries through the bundled helpers and saves results to a file for separate parsing.

Uses

Latest review

What you need · 3

Requires uv installed and available on PATH, with setup handled through the uv skill.

The helper scripts require Python 3.10 or newer.


Access · 2

This skill

UCSC Genome Browser

Read

Retrieves UCSC genomic track data

uv

Execute

Sets up uv