Handle annotated single-cell data with AnnData.
Guides the creation, storage, combination, and manipulation of annotated data matrices with AnnData.
When to use it
Use when working with AnnData objects, genomics data formats, large annotated datasets, or dataset concatenation and filtering.
It changes how the agent writes AnnData code for data handling, emphasizing memory efficiency, performance, and reproducibility.
What you provide
Requires Python 3.12 or newer.
Requires anndata; the documented installation targets version 0.13.4.
This skill
arXiv
Looks up citation metadata
anndata
Installs the anndata package